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| First Round Draft Pick History |
| 1 | 24 | 24 | 2010 | Annual Draft | C | Derek | Norris | MIN |
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| 1 | 4 | 4 | 2009 | Annual Draft | OF | Daniel | Murphy | MLB |
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| Complete Draft History |
| 1 | 24 | 24 | 2010 | Annual Draft | C | Derek | Norris | MIN |
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| 3 | 7 | 63 | 2010 | Annual Draft | SS | Alex | Gonzalez | MLB |
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| 3 | 24 | 80 | 2010 | Annual Draft | SP | Jason | Knapp | MIN |
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| 4 | 6 | 90 | 2010 | Annual Draft | C | Brayan | Pena | MLB |
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| 6 | 6 | 146 | 2010 | Annual Draft | SP | Chuck | Lofgren | MIN |
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| 7 | 7 | 175 | 2010 | Annual Draft | RP | Justin | Berg | MLB |
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| 8 | 6 | 202 | 2010 | Annual Draft | SP | Chris J | Carpenter | MIN |
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| 9 | 7 | 231 | 2010 | Annual Draft | C | Sebastian | Valle | MIN |
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| 10 | 6 | 258 | 2010 | Annual Draft | OF | Tim | Wheeler | COL |
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| 11 | 7 | 287 | 2010 | Annual Draft | SS | Yordy | Cabrera | HS |
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| 12 | 6 | 314 | 2010 | Annual Draft | SP | Cameron | Bedrosian | HS |
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| 1 | 4 | 4 | 2009 | Annual Draft | OF | Daniel | Murphy | MLB |
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| 2 | 4 | 32 | 2009 | Annual Draft | SS | Cale | Iorg | MIN |
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| 3 | 4 | 60 | 2009 | Annual Draft | RP | Alfredo | Aceves | MLB |
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| 4 | 4 | 88 | 2009 | Annual Draft | RP | Scott | Richmond | MLB |
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| 5 | 4 | 116 | 2009 | Annual Draft | SS | Luis | Cruz | MLB |
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| 6 | 4 | 144 | 2009 | Annual Draft | C | Luke | Montz | MLB |
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| 7 | 4 | 172 | 2009 | Annual Draft | 1B | Wes | Bankston | MLB |
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| 8 | 4 | 200 | 2009 | Annual Draft | OF | Jolbert | Cabrera | MLB |
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| 9 | 4 | 228 | 2009 | Annual Draft | P | Alberto | Castillo | MLB |
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| 10 | 4 | 256 | 2009 | Annual Draft | 2B | Jonathan | Herrera | MLB |
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| 11 | 4 | 284 | 2009 | Annual Draft | SP | Jon | Kibler | MIN |
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| 12 | 4 | 312 | 2009 | Annual Draft | 2B | Will | Rhymes | MIN |
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| 13 | 4 | 340 | 2009 | Annual Draft | SP | Alex | Caldera | MIN |
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| 14 | 4 | 368 | 2009 | Annual Draft | 3B | Jim | Negrych | MIN |
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| 15 | 4 | 396 | 2009 | Annual Draft | 1B | Roberto | Lopez | MIN |
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| 3 | 11 | 67 | 2008 | Inaugural Draft | SP | Clay | Buchholz | MLB |
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| 3 | 26 | 82 | 2008 | Inaugural Draft | OF | Josh | Hamilton | MLB |
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| 4 | 3 | 87 | 2008 | Inaugural Draft | SP | Francisco | Liriano | MLB |
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| 4 | 18 | 102 | 2008 | Inaugural Draft | RP | Joba | Chamberlain | MLB |
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| 5 | 11 | 123 | 2008 | Inaugural Draft | OF | Jacoby | Ellsbury | MLB |
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| 5 | 26 | 138 | 2008 | Inaugural Draft | 1B | Daric | Barton | MLB |
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| 6 | 3 | 143 | 2008 | Inaugural Draft | C | Jeff | Clement | MLB |
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| 7 | 26 | 194 | 2008 | Inaugural Draft | 3B | Josh | Fields | MLB |
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| 8 | 3 | 199 | 2008 | Inaugural Draft | RP | Joe | Nathan | MLB |
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| 9 | 26 | 250 | 2008 | Inaugural Draft | RP | Huston | Street | MLB |
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| 10 | 3 | 255 | 2008 | Inaugural Draft | RP | Bobby | Jenks | MLB |
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| 11 | 26 | 306 | 2008 | Inaugural Draft | OF | Wily Mo | Pena | MLB |
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| 12 | 3 | 311 | 2008 | Inaugural Draft | 2B | Kaz | Matsui | MLB |
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| 14 | 3 | 367 | 2008 | Inaugural Draft | 1B | Steve | Pearce | MLB |
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| 15 | 26 | 418 | 2008 | Inaugural Draft | SS | Alex | Gonzalez | MLB |
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| 16 | 3 | 423 | 2008 | Inaugural Draft | OF | Jayson | Werth | MLB |
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| 17 | 26 | 474 | 2008 | Inaugural Draft | OF | Matt | Stairs | MLB |
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| 18 | 3 | 479 | 2008 | Inaugural Draft | DH | Frank | Thomas | MLB |
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| 22 | 3 | 591 | 2008 | Inaugural Draft | SP | Troy | Patton | MLB |
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| 23 | 26 | 642 | 2008 | Inaugural Draft | SP | Ross | Detwiler | MLB |
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| 24 | 3 | 647 | 2008 | Inaugural Draft | OF | Joey | Gathright | MLB |
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| 26 | 3 | 703 | 2008 | Inaugural Draft | RP | Joe | Beimel | MLB |
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| 27 | 26 | 754 | 2008 | Inaugural Draft | RP | Yorman | Bazardo | MLB |
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| 28 | 3 | 759 | 2008 | Inaugural Draft | RP | Jonathan | Albaladejo | MLB |
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| 29 | 26 | 810 | 2008 | Inaugural Draft | RP | Joe | Thatcher | MLB |
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| 30 | 3 | 815 | 2008 | Inaugural Draft | OF | Fred | Lewis | MLB |
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| 31 | 26 | 866 | 2008 | Inaugural Draft | SP | Hiroki | Kuroda | OS |
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| 32 | 3 | 871 | 2008 | Inaugural Draft | SP | Kenshin | Kawakami | OS |
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| 36 | 3 | 983 | 2008 | Inaugural Draft | SP | J.D. | Durbin | MLB |
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| 37 | 26 | 1034 | 2008 | Inaugural Draft | SP | Felipe | Paulino | MLB |
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| 38 | 3 | 1039 | 2008 | Inaugural Draft | SP | Ricky | Nolasco | MLB |
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| 40 | 3 | 1095 | 2008 | Inaugural Draft | 2B | John | Shelby | MIN |
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| 41 | 26 | 1146 | 2008 | Inaugural Draft | 1B | Chris | Carter | MIN |
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| 42 | 3 | 1151 | 2008 | Inaugural Draft | SP | A.J. | Murray | MLB |
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| 43 | 26 | 1202 | 2008 | Inaugural Draft | OF | Victor | Diaz | MLB |
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| 44 | 3 | 1207 | 2008 | Inaugural Draft | C | Gustavo | Molina | MLB |
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| 50 | 3 | 1375 | 2008 | Inaugural Draft | RP | Kurt | Birkins | MLB |
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| 51 | 26 | 1426 | 2008 | Inaugural Draft | C | Wil | Nieves | MLB |
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| 52 | 3 | 1431 | 2008 | Inaugural Draft | SP | Eric | Stults | MLB |
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| 53 | 26 | 1482 | 2008 | Inaugural Draft | SP | Brian | Lawrence | MLB |
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| 54 | 3 | 1487 | 2008 | Inaugural Draft | SP | Russ | Ortiz | MLB |
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| 55 | 26 | 1538 | 2008 | Inaugural Draft | OF | Hiram | Bocachica | MLB |
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| 56 | 3 | 1543 | 2008 | Inaugural Draft | SS | Angel M. | Berroa | MLB |
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| 57 | 26 | 1594 | 2008 | Inaugural Draft | OF | David | Newhan | MLB |
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| 58 | 3 | 1599 | 2008 | Inaugural Draft | 1B | Jeff | Bailey | MLB |
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| 60 | 3 | 1655 | 2008 | Inaugural Draft | RP | Sean | Henn | MLB |
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