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| First Round Draft Pick History |
| 1 | 20 | 20 | 2016 | Annual Draft | RP | Ryan | Madson | MLB |
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| 1 | 16 | 16 | 2015 | Annual Draft | OF | David | Peralta | MLB |
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| 1 | 16 | 16 | 2014 | Annual Draft | SP | Nick | Tepesch | MLB |
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| 1 | 25 | 25 | 2013 | Annual Draft | SP | Joe | Kelly | MLB |
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| 1 | 19 | 19 | 2012 | Annual Draft | RP | Aaron | Crow | MLB |
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| 1 | 28 | 28 | 2011 | Annual Draft | P | Barry | Enright | MLB |
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| 1 | 20 | 20 | 2010 | Annual Draft | SP | Tim | Stauffer | MLB |
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| 1 | 28 | 28 | 2009 | Annual Draft | RP | Jesse | Carlson | MLB |
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| 1 | 8 | 8 | 2008 | Inaugural Draft | OF | Matt | Holliday | MLB |
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| Complete Draft History |
| 2 | 22 | 50 | 2017 | Annual Draft | SP | Ariel | Miranda | MLB |
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| 3 | 22 | 78 | 2017 | Annual Draft | OF | Jeremy | Hazelbaker | MLB |
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| 4 | 22 | 106 | 2017 | Annual Draft | RP | Dan | Altavilla | MLB |
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| 5 | 22 | 134 | 2017 | Annual Draft | OF | Jake | Smolinski | MLB |
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| 6 | 22 | 162 | 2017 | Annual Draft | RP | Paul | Fry | MIN |
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| 7 | 22 | 190 | 2017 | Annual Draft | RP | Thyago | Vieira | MIN |
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| 8 | 22 | 218 | 2017 | Annual Draft | RP | Carlos | Estevez | MLB |
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| 9 | 22 | 246 | 2017 | Annual Draft | SP | Justin | Haley | MIN |
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| 10 | 22 | 274 | 2017 | Annual Draft | 3B | Paul | DeJong | MIN |
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| 11 | 22 | 302 | 2017 | Annual Draft | SP | Paul | Blackburn | MIN |
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| 12 | 22 | 330 | 2017 | Annual Draft | SP | Matt | Koch | MLB |
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| 13 | 22 | 358 | 2017 | Annual Draft | RP | Ryan | Sherriff | MIN |
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| 14 | 22 | 386 | 2017 | Annual Draft | SP | Dylan | Unsworth | MIN |
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| 15 | 22 | 414 | 2017 | Annual Draft | 1B | Jonah | Arenado | MIN |
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| 16 | 22 | 442 | 2017 | Annual Draft | RP | Keith | Hessler | MLB |
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| 17 | 22 | 470 | 2017 | Annual Draft | RP | Dean | Kiekhefer | MLB |
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| 18 | 22 | 498 | 2017 | Annual Draft | RP | Gonzalez | Germen | MLB |
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| 19 | 22 | 526 | 2017 | Annual Draft | SP | Adrian | Sampson | MLB |
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| 20 | 22 | 554 | 2017 | Annual Draft | RP | Justin | Marks | MLB |
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| 1 | 20 | 20 | 2016 | Annual Draft | RP | Ryan | Madson | MLB |
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| 2 | 19 | 47 | 2016 | Annual Draft | 1B | Clint | Robinson | MLB |
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| 3 | 20 | 76 | 2016 | Annual Draft | RP | Felipe | Rivero | MLB |
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| 4 | 19 | 103 | 2016 | Annual Draft | RP | Josh | Osich | MLB |
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| 5 | 20 | 132 | 2016 | Annual Draft | RP | Mitch | Harris | MLB |
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| 6 | 19 | 159 | 2016 | Annual Draft | OF | Shane | Peterson | MLB |
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| 7 | 20 | 188 | 2016 | Annual Draft | OF | Tyler | Goeddel | MIN |
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| 8 | 19 | 215 | 2016 | Annual Draft | OF | Jabari | Blash | MIN |
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| 9 | 20 | 244 | 2016 | Annual Draft | SP | Antonio | Senzatela | MIN |
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| 10 | 19 | 271 | 2016 | Annual Draft | RP | Pat | Venditte | MLB |
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| 11 | 20 | 300 | 2016 | Annual Draft | C | Dom | Nunez | MIN |
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| 12 | 19 | 327 | 2016 | Annual Draft | OF | Braden | Bishop | MIN |
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| 13 | 20 | 356 | 2016 | Annual Draft | 2B | Jamie | Westbrook | MIN |
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| 14 | 19 | 383 | 2016 | Annual Draft | SS | Drew | Jackson | MIN |
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| 15 | 20 | 412 | 2016 | Annual Draft | RP | Ryne | Harper | MIN |
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| 16 | 19 | 439 | 2016 | Annual Draft | RP | Mayckol | Guaipe | MLB |
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| 17 | 20 | 468 | 2016 | Annual Draft | SP | Cody | Martin | MLB |
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| 1 | 16 | 16 | 2015 | Annual Draft | OF | David | Peralta | MLB |
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| 2 | 16 | 44 | 2015 | Annual Draft | RP | Joe | Beimel | MLB |
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| 3 | 16 | 72 | 2015 | Annual Draft | SP | Josh | Tomlin | MLB |
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| 4 | 16 | 100 | 2015 | Annual Draft | OF | Jordy | Lara | MIN |
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| 5 | 16 | 128 | 2015 | Annual Draft | RP | David | Rollins | MIN |
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| 6 | 16 | 156 | 2015 | Annual Draft | RP | Samuel | Tuivailala | MIN |
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| 7 | 16 | 184 | 2015 | Annual Draft | SP | Jordan | Pries | MIN |
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| 8 | 16 | 212 | 2015 | Annual Draft | SP | Forrest | Snow | MIN |
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| 9 | 16 | 240 | 2015 | Annual Draft | OF | Tyler | Holt | MLB |
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| 10 | 16 | 268 | 2015 | Annual Draft | RP | Rob | Rasmussen | MLB |
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| 11 | 16 | 296 | 2015 | Annual Draft | SS | Matthew | Reynolds | MIN |
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| 12 | 16 | 324 | 2015 | Annual Draft | SP | Ryan | Merritt | MIN |
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| 13 | 16 | 352 | 2015 | Annual Draft | RP | Adam | Liberatore | MIN |
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| 14 | 16 | 380 | 2015 | Annual Draft | SP | Logan | Verrett | MIN |
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| 15 | 16 | 408 | 2015 | Annual Draft | 2B | Jacob | Wilson | MIN |
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| 16 | 16 | 436 | 2015 | Annual Draft | RP | Jorge | Rondon | MLB |
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| 17 | 16 | 464 | 2015 | Annual Draft | RP | Eric | Fornataro | MLB |
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| 1 | 16 | 16 | 2014 | Annual Draft | SP | Nick | Tepesch | MLB |
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| 2 | 17 | 45 | 2014 | Annual Draft | SP | Andre | Rienzo | MLB |
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| 3 | 16 | 72 | 2014 | Annual Draft | RP | Scott | Rice | MLB |
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| 4 | 17 | 101 | 2014 | Annual Draft | RP | Will | Harris | MLB |
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| 5 | 16 | 128 | 2014 | Annual Draft | RP | Luke | Putkonen | MLB |
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| 6 | 17 | 157 | 2014 | Annual Draft | SS | Chris | Taylor | MIN |
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| 7 | 16 | 184 | 2014 | Annual Draft | RP | Logan | Bawcom | MIN |
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| 8 | 17 | 213 | 2014 | Annual Draft | C | Tyler | Marlette | MIN |
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| 9 | 16 | 240 | 2014 | Annual Draft | SP | Jake | deGrom | MIN |
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| 10 | 17 | 269 | 2014 | Annual Draft | 2B | Ty | Kelly | MIN |
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| 11 | 16 | 296 | 2014 | Annual Draft | SP | Tim | Cooney | MIN |
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| 12 | 17 | 325 | 2014 | Annual Draft | 1B | Justin | Seager | MIN |
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| 13 | 16 | 352 | 2014 | Annual Draft | SP | Arnold | Leon | MIN |
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| 14 | 17 | 381 | 2014 | Annual Draft | OF | Mike | O'Neill | MIN |
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| 15 | 16 | 408 | 2014 | Annual Draft | SP | Kyle | Hendricks | MIN |
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| 16 | 17 | 437 | 2014 | Annual Draft | RP | Keith | Butler | MLB |
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| 1 | 25 | 25 | 2013 | Annual Draft | SP | Joe | Kelly | MLB |
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| 2 | 25 | 53 | 2013 | Annual Draft | SP | Travis | Blackley | MLB |
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| 3 | 25 | 81 | 2013 | Annual Draft | SP | Cole | De Vries | MLB |
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| 4 | 25 | 109 | 2013 | Annual Draft | RP | Clay | Rapada | MLB |
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| 5 | 25 | 137 | 2013 | Annual Draft | SP | Dallas | Keuchel | MLB |
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| 6 | 25 | 165 | 2013 | Annual Draft | RP | Francisley | Bueno | MLB |
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| 7 | 25 | 193 | 2013 | Annual Draft | RP | Tom | Layne | MLB |
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| 8 | 25 | 221 | 2013 | Annual Draft | RP | Sam | Freeman | MLB |
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| 9 | 25 | 249 | 2013 | Annual Draft | SP | Andrew | Carraway | MIN |
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| 10 | 25 | 277 | 2013 | Annual Draft | RP | Kevin | Quackenbush | MIN |
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| 11 | 25 | 305 | 2013 | Annual Draft | OF | Matt | McBride | MLB |
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| 12 | 25 | 333 | 2013 | Annual Draft | RP | Bobby | LaFromboise | MIN |
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| 13 | 25 | 361 | 2013 | Annual Draft | RP | Rob | Scahill | MLB |
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| 14 | 25 | 389 | 2013 | Annual Draft | SP | Jordan | Shipers | MIN |
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| 15 | 25 | 417 | 2013 | Annual Draft | RP | Doug | Slaten | MLB |
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| 1 | 19 | 19 | 2012 | Annual Draft | RP | Aaron | Crow | MLB |
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| 2 | 19 | 47 | 2012 | Annual Draft | 2B | Taylor | Green | MLB |
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| 3 | 19 | 75 | 2012 | Annual Draft | 1B | Jordan | Pacheco | MLB |
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| 5 | 19 | 131 | 2012 | Annual Draft | RP | Joe | Paterson | MLB |
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| 6 | 19 | 159 | 2012 | Annual Draft | RP | David | Carpenter | MLB |
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| 7 | 19 | 187 | 2012 | Annual Draft | SS | Thomas | Field | MLB |
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| 8 | 19 | 215 | 2012 | Annual Draft | RP | Steve | Delabar | MLB |
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| 9 | 19 | 243 | 2012 | Annual Draft | SS | Munenori | Kawasaki | OS |
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| 10 | 19 | 271 | 2012 | Annual Draft | RP | Jordan | Swagerty | MIN |
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| 11 | 19 | 299 | 2012 | Annual Draft | OF | Chih-Hsien | Chiang | MIN |
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| 12 | 19 | 327 | 2012 | Annual Draft | SP | Gerardo | Concepcion | OS |
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| 13 | 19 | 355 | 2012 | Annual Draft | 1B | Josh | Satin | MLB |
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| 14 | 19 | 383 | 2012 | Annual Draft | SS | Didi | Gregorius | MIN |
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| 15 | 19 | 411 | 2012 | Annual Draft | OF | Denis | Phipps | MIN |
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| 1 | 28 | 28 | 2011 | Annual Draft | P | Barry | Enright | MLB |
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| 2 | 27 | 55 | 2011 | Annual Draft | P | Brad | Thomas | MLB |
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| 3 | 28 | 84 | 2011 | Annual Draft | P | Casey | Coleman | MLB |
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| 4 | 27 | 111 | 2011 | Annual Draft | P | Mike | McClendon | MLB |
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| 5 | 28 | 140 | 2011 | Annual Draft | P | Brian | Sweeney | MLB |
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| 6 | 27 | 167 | 2011 | Annual Draft | P | Travis | Schlichting | MLB |
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| 7 | 28 | 196 | 2011 | Annual Draft | OF | Colin | Curtis | MLB |
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| 8 | 27 | 223 | 2011 | Annual Draft | RP | Josh | Lueke | MIN |
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| 9 | 28 | 252 | 2011 | Annual Draft | SP | Mauricio | Robles | MIN |
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| 10 | 27 | 279 | 2011 | Annual Draft | OF | Joe | Mather | MLB |
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| 11 | 28 | 308 | 2011 | Annual Draft | 1B | Mark | Hamilton | MLB |
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| 12 | 27 | 335 | 2011 | Annual Draft | C | Steve | Hill | MLB |
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| 13 | 28 | 364 | 2011 | Annual Draft | OF | Cole | Garner | MIN |
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| 14 | 27 | 391 | 2011 | Annual Draft | P | Anthony | Varvaro | MLB |
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| 15 | 28 | 420 | 2011 | Annual Draft | RP | Tom | Wilhelmsen | MIN |
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| 1 | 20 | 20 | 2010 | Annual Draft | SP | Tim | Stauffer | MLB |
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| 2 | 20 | 48 | 2010 | Annual Draft | RP | Brian | Sanches | MLB |
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| 3 | 20 | 76 | 2010 | Annual Draft | SP | Doug | Fister | MLB |
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| 4 | 20 | 104 | 2010 | Annual Draft | OF | Sam | Fuld | MLB |
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| 5 | 20 | 132 | 2010 | Annual Draft | OF | Tyson | Gillies | MIN |
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| 6 | 20 | 160 | 2010 | Annual Draft | C | Koby | Clemens | MIN |
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| 7 | 20 | 188 | 2010 | Annual Draft | SP | Samuel | Deduno | MIN |
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| 8 | 20 | 216 | 2010 | Annual Draft | C | John | Hester | MLB |
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| 9 | 20 | 244 | 2010 | Annual Draft | RP | Jeff | Gray | MLB |
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| 10 | 3 | 255 | 2010 | Annual Draft | RP | Josh | Butler | MLB |
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| 10 | 20 | 272 | 2010 | Annual Draft | OF | Carlos | Peguero | MIN |
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| 11 | 20 | 300 | 2010 | Annual Draft | RP | Chris | Smith | MLB |
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| 12 | 20 | 328 | 2010 | Annual Draft | 3B | Mario | Martinez | MIN |
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| 13 | 20 | 356 | 2010 | Annual Draft | SP | Pat | McAnaney | MIN |
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| 14 | 20 | 384 | 2010 | Annual Draft | SP | Trey | Hearne | MIN |
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| 15 | 20 | 412 | 2010 | Annual Draft | SP | Reidier | Gonzalez | MIN |
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| 1 | 28 | 28 | 2009 | Annual Draft | RP | Jesse | Carlson | MLB |
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| 2 | 28 | 56 | 2009 | Annual Draft | C | Ryan | Hanigan | MLB |
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| 3 | 28 | 84 | 2009 | Annual Draft | SP | RA | Dickey | MLB |
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| 4 | 28 | 112 | 2009 | Annual Draft | RP | Josh | Fields | MIN |
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| 5 | 28 | 140 | 2009 | Annual Draft | P | Mike | Hinckley | MLB |
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| 6 | 28 | 168 | 2009 | Annual Draft | SP | Michael | Pineda | MIN |
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| 7 | 28 | 196 | 2009 | Annual Draft | 2B | Drew | Sutton | MIN |
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| 8 | 28 | 224 | 2009 | Annual Draft | SP | Daniel | McCutchen | MIN |
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| 9 | 28 | 252 | 2009 | Annual Draft | RP | Shawn | Kelley | MIN |
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| 10 | 28 | 280 | 2009 | Annual Draft | P | Steven | Register | MLB |
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| 11 | 28 | 308 | 2009 | Annual Draft | OF | Chris | Carter | MLB |
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| 12 | 28 | 336 | 2009 | Annual Draft | SP | Kevin | Eichhorn | MIN |
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| 13 | 28 | 364 | 2009 | Annual Draft | P | Jeff | Ridgway | MLB |
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| 14 | 28 | 392 | 2009 | Annual Draft | P | Justin | Thomas | MLB |
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| 15 | 28 | 420 | 2009 | Annual Draft | RP | Matt | Scherer | MIN |
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| 1 | 8 | 8 | 2008 | Inaugural Draft | OF | Matt | Holliday | MLB |
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| 2 | 21 | 49 | 2008 | Inaugural Draft | SP | Roy | Halladay | MLB |
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| 3 | 8 | 64 | 2008 | Inaugural Draft | RP | J.J. | Putz | MLB |
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| 4 | 21 | 105 | 2008 | Inaugural Draft | SP | Javier | Vazquez | MLB |
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| 5 | 8 | 120 | 2008 | Inaugural Draft | OF | Carlos N. | Lee | MLB |
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| 6 | 21 | 161 | 2008 | Inaugural Draft | 3B | Adrian | Beltre | MLB |
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| 7 | 8 | 176 | 2008 | Inaugural Draft | OF | Nick | Swisher | MLB |
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| 8 | 21 | 217 | 2008 | Inaugural Draft | SS | Khalil | Greene | MLB |
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| 9 | 8 | 232 | 2008 | Inaugural Draft | OF | Juan | Pierre | MLB |
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| 10 | 21 | 273 | 2008 | Inaugural Draft | RP | Hideki | Okajima | MLB |
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| 11 | 8 | 288 | 2008 | Inaugural Draft | C | A.J. | Pierzynski | MLB |
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| 12 | 21 | 329 | 2008 | Inaugural Draft | SP | Miguel | Batista | MLB |
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| 13 | 8 | 344 | 2008 | Inaugural Draft | SP | Brandon | Morrow | MLB |
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| 14 | 21 | 385 | 2008 | Inaugural Draft | 2B | Mark | Grudzielanek | MLB |
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| 15 | 8 | 400 | 2008 | Inaugural Draft | SP | Nate | Robertson | MLB |
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| 16 | 21 | 441 | 2008 | Inaugural Draft | RP | Russ | Springer | MLB |
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| 17 | 8 | 456 | 2008 | Inaugural Draft | 1B | Lyle | Overbay | MLB |
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| 18 | 21 | 497 | 2008 | Inaugural Draft | RP | George | Sherrill | MLB |
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| 19 | 8 | 512 | 2008 | Inaugural Draft | RP | Joel | Pineiro | MLB |
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| 20 | 21 | 553 | 2008 | Inaugural Draft | OF | Brian | Giles | MLB |
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| 21 | 8 | 568 | 2008 | Inaugural Draft | SP | Brad | Hennessey | MLB |
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| 22 | 21 | 609 | 2008 | Inaugural Draft | RP | Jared | Burton | MLB |
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| 23 | 8 | 624 | 2008 | Inaugural Draft | C | Jamie | Burke | MLB |
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| 24 | 21 | 665 | 2008 | Inaugural Draft | SP | Claudio | Vargas | MLB |
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| 26 | 21 | 721 | 2008 | Inaugural Draft | OF | Willie | Bloomquist | MLB |
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| 27 | 8 | 736 | 2008 | Inaugural Draft | RP | Ehren | Wassermann | MLB |
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| 28 | 21 | 777 | 2008 | Inaugural Draft | OF | Jeff | Baker | MLB |
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| 29 | 8 | 792 | 2008 | Inaugural Draft | SP | Cha Seung | Baek | MLB |
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| 31 | 8 | 848 | 2008 | Inaugural Draft | OF | Chris | Duffy | MLB |
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| 33 | 8 | 904 | 2008 | Inaugural Draft | SP | Dan L. | Meyer | MLB |
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| 34 | 21 | 945 | 2008 | Inaugural Draft | C | Eliezer | Alfonzo | MLB |
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| 35 | 8 | 960 | 2008 | Inaugural Draft | OF | Tony K. | Gwynn | MLB |
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| 36 | 21 | 1001 | 2008 | Inaugural Draft | 2B | Martin | Prado | MLB |
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| 38 | 21 | 1057 | 2008 | Inaugural Draft | RP | Scott | Dohmann | MLB |
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| 39 | 8 | 1072 | 2008 | Inaugural Draft | OF | Mike | Morse | MLB |
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| 40 | 21 | 1113 | 2008 | Inaugural Draft | SP | Mike | Hampton | MLB |
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| 41 | 8 | 1128 | 2008 | Inaugural Draft | RP | Ryan | Speier | MLB |
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| 43 | 8 | 1184 | 2008 | Inaugural Draft | SS | Clint | Barmes | MLB |
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| 44 | 21 | 1225 | 2008 | Inaugural Draft | RP | Mark | Lowe | MLB |
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| 46 | 21 | 1281 | 2008 | Inaugural Draft | C | Rob | Johnson | MLB |
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| 48 | 21 | 1337 | 2008 | Inaugural Draft | RP | Scott | Schoeneweis | MLB |
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| 50 | 21 | 1393 | 2008 | Inaugural Draft | SP | John | Rheinecker | MLB |
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| 55 | 8 | 1520 | 2008 | Inaugural Draft | SP | Jeff | Karstens | MLB |
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