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| First Round Draft Pick History |
| 1 | 23 | 23 | 2013 | Annual Draft | 3B | Joaquin | Arias | MLB |
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| 1 | 17 | 17 | 2012 | Annual Draft | SP | Bartolo | Colon | MLB |
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| 1 | 2 | 2 | 2011 | Annual Draft | P | R.A. | Dickey | MLB |
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| 1 | 15 | 15 | 2011 | Annual Draft | P | Hisanori | Takahashi | MLB |
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| 1 | 27 | 27 | 2010 | Annual Draft | SP | Jeff | Weaver | MLB |
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| 1 | 16 | 16 | 2008 | Inaugural Draft | SP | Fausto | Carmona | MLB |
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| Complete Draft History |
| 1 | 23 | 23 | 2013 | Annual Draft | 3B | Joaquin | Arias | MLB |
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| 2 | 23 | 51 | 2013 | Annual Draft | RP | Jim | Miller | MLB |
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| 3 | 23 | 79 | 2013 | Annual Draft | OF | Scott | Podsednik | MLB |
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| 4 | 23 | 107 | 2013 | Annual Draft | OF | Drew | Sutton | MLB |
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| 5 | 23 | 135 | 2013 | Annual Draft | RP | Lucas | Luetge | MLB |
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| 6 | 23 | 163 | 2013 | Annual Draft | RP | Miles | Mikolas | MLB |
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| 7 | 23 | 191 | 2013 | Annual Draft | 3B | Ray | Olmedo | MLB |
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| 8 | 23 | 219 | 2013 | Annual Draft | RP | Luis | Perdomo | MLB |
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| 9 | 23 | 247 | 2013 | Annual Draft | 2B | Tony | Abreu | MLB |
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| 10 | 23 | 275 | 2013 | Annual Draft | RP | Chuckie | Fick | MLB |
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| 11 | 23 | 303 | 2013 | Annual Draft | 1B | Hector | Luna | MLB |
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| 12 | 23 | 331 | 2013 | Annual Draft | C | Stephen | Vogt | MLB |
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| 13 | 23 | 359 | 2013 | Annual Draft | OF | Matt | Carson | MLB |
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| 14 | 23 | 387 | 2013 | Annual Draft | SP | Kip | Wells | MLB |
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| 1 | 17 | 17 | 2012 | Annual Draft | SP | Bartolo | Colon | MLB |
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| 3 | 17 | 73 | 2012 | Annual Draft | RP | Cory | Wade | MLB |
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| 4 | 17 | 101 | 2012 | Annual Draft | C | Tony | Cruz | MLB |
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| 6 | 17 | 157 | 2012 | Annual Draft | RP | Jason | Grilli | MLB |
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| 7 | 17 | 185 | 2012 | Annual Draft | 2B | Brian | Dinkelman | MLB |
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| 8 | 17 | 213 | 2012 | Annual Draft | 2B | Alfredo | Amezaga | MLB |
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| 9 | 10 | 234 | 2012 | Annual Draft | OF | Matt | Young | MLB |
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| 9 | 17 | 241 | 2012 | Annual Draft | RP | Mike | Zagurski | MLB |
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| 1 | 2 | 2 | 2011 | Annual Draft | P | R.A. | Dickey | MLB |
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| 1 | 15 | 15 | 2011 | Annual Draft | P | Hisanori | Takahashi | MLB |
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| 2 | 14 | 42 | 2011 | Annual Draft | C | Drew | Butera | MLB |
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| 3 | 15 | 71 | 2011 | Annual Draft | 3B | Miguel | Cairo | MLB |
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| 4 | 14 | 98 | 2011 | Annual Draft | OF | Jackie | Bradley | COL |
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| 5 | 15 | 127 | 2011 | Annual Draft | C | Chun-Hsiu | Chen | MIN |
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| 6 | 14 | 154 | 2011 | Annual Draft | SP | Matthew | Lollis | MIN |
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| 7 | 15 | 183 | 2011 | Annual Draft | SP | Joe | Wieland | MIN |
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| 8 | 14 | 210 | 2011 | Annual Draft | 2B | Mark | Grudzielanek | MLB |
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| 9 | 15 | 239 | 2011 | Annual Draft | SP | Deryk | Hooker | MIN |
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| 10 | 14 | 266 | 2011 | Annual Draft | SP | Felix | Sterling | MIN |
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| 11 | 15 | 295 | 2011 | Annual Draft | P | Omar | Beltre | MLB |
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| 12 | 14 | 322 | 2011 | Annual Draft | SP | Brandol | Perez | MIN |
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| 1 | 27 | 27 | 2010 | Annual Draft | SP | Jeff | Weaver | MLB |
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| 2 | 27 | 55 | 2010 | Annual Draft | C | Robert | Stock | MIN |
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| 4 | 27 | 111 | 2010 | Annual Draft | SP | Chris | Jakubauskas | MLB |
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| 5 | 27 | 139 | 2010 | Annual Draft | SP | Ryan | Sadowski | MLB |
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| 6 | 27 | 167 | 2010 | Annual Draft | 3B | Stetson | Allie | HS |
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| 7 | 27 | 195 | 2010 | Annual Draft | SP | Bryan | Augenstein | MLB |
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| 8 | 3 | 199 | 2010 | Annual Draft | RP | Elmer | Dessens | MLB |
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| 8 | 27 | 223 | 2010 | Annual Draft | 1B | Tommy | Everidge | MLB |
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| 9 | 27 | 251 | 2010 | Annual Draft | RP | Ken | Takahashi | MLB |
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| 10 | 27 | 279 | 2010 | Annual Draft | C | Kevin | Richardson | MLB |
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| 11 | 27 | 307 | 2010 | Annual Draft | 2B | Brooks | Conrad | MLB |
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| 12 | 27 | 335 | 2010 | Annual Draft | RP | Bill | Murphy | MLB |
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| 13 | 27 | 363 | 2010 | Annual Draft | OF | Matt | Carson | MLB |
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| 2 | 26 | 54 | 2009 | Annual Draft | OF | Fernando | Tatis | MLB |
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| 3 | 26 | 82 | 2009 | Annual Draft | SP | Mike | Minor | COL |
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| 4 | 12 | 96 | 2009 | Annual Draft | SP | Kendal | Volz | COL |
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| 4 | 26 | 110 | 2009 | Annual Draft | SP | Matthew | Purke | HS |
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| 5 | 26 | 138 | 2009 | Annual Draft | P | Keiichi | Yabu | MLB |
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| 6 | 26 | 166 | 2009 | Annual Draft | 1B | Oscar | Salazar | MLB |
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| 7 | 26 | 194 | 2009 | Annual Draft | RP | Franklyn | German | MLB |
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| 8 | 26 | 222 | 2009 | Annual Draft | C | Austin | Maddox | HS |
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| 9 | 26 | 250 | 2009 | Annual Draft | P | Vladimir | Nunez | MLB |
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| 10 | 26 | 278 | 2009 | Annual Draft | SS | Gregorio | Petit | MLB |
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| 1 | 16 | 16 | 2008 | Inaugural Draft | SP | Fausto | Carmona | MLB |
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| 2 | 13 | 41 | 2008 | Inaugural Draft | SP | Tim | Hudson | MLB |
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| 3 | 16 | 72 | 2008 | Inaugural Draft | OF | Magglio | Ordonez | MLB |
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| 4 | 13 | 97 | 2008 | Inaugural Draft | SP | John | Smoltz | MLB |
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| 5 | 16 | 128 | 2008 | Inaugural Draft | 3B | Chipper | Jones | MLB |
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| 6 | 13 | 153 | 2008 | Inaugural Draft | 1B | James | Loney | MLB |
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| 7 | 16 | 184 | 2008 | Inaugural Draft | RP | Manuel | Corpas | MLB |
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| 8 | 13 | 209 | 2008 | Inaugural Draft | SS | Edgar | Renteria | MLB |
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| 9 | 16 | 240 | 2008 | Inaugural Draft | RP | Peter | Moylan | MLB |
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| 10 | 13 | 265 | 2008 | Inaugural Draft | OF | Mark | Teahen | MLB |
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| 11 | 16 | 296 | 2008 | Inaugural Draft | OF | Jose | Guillen | MLB |
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| 12 | 13 | 321 | 2008 | Inaugural Draft | SP | Jesse | Litsch | MLB |
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| 13 | 16 | 352 | 2008 | Inaugural Draft | 2B | Ronnie | Belliard | MLB |
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| 14 | 13 | 377 | 2008 | Inaugural Draft | SP | Curt | Schilling | MLB |
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| 15 | 16 | 408 | 2008 | Inaugural Draft | SP | Joe | Saunders | MLB |
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| 16 | 13 | 433 | 2008 | Inaugural Draft | C | Mike | Redmond | MLB |
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| 17 | 16 | 464 | 2008 | Inaugural Draft | RP | Scott | Downs | MLB |
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| 18 | 13 | 489 | 2008 | Inaugural Draft | OF | Shawn | Green | MLB |
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| 19 | 16 | 520 | 2008 | Inaugural Draft | OF | David | Murphy | MLB |
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| 20 | 13 | 545 | 2008 | Inaugural Draft | C | Brad | Ausmus | MLB |
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| 21 | 16 | 576 | 2008 | Inaugural Draft | 1B | Ross | Gload | MLB |
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| 22 | 13 | 601 | 2008 | Inaugural Draft | RP | Darren | Oliver | MLB |
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| 25 | 16 | 688 | 2008 | Inaugural Draft | RP | Rudy | Seanez | MLB |
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| 26 | 13 | 713 | 2008 | Inaugural Draft | OF | Sammy | Sosa | MLB |
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| 27 | 16 | 744 | 2008 | Inaugural Draft | SP | Leo | Nunez | MLB |
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| 28 | 13 | 769 | 2008 | Inaugural Draft | SS | John | McDonald | MLB |
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| 29 | 16 | 800 | 2008 | Inaugural Draft | RP | Bob | Wickman | MLB |
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| 30 | 13 | 825 | 2008 | Inaugural Draft | SP | Brandon | Backe | MLB |
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| 32 | 13 | 881 | 2008 | Inaugural Draft | RP | Royce | Ring | MLB |
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| 37 | 16 | 1024 | 2008 | Inaugural Draft | 2B | Ray | Durham | MLB |
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| 40 | 13 | 1105 | 2008 | Inaugural Draft | RP | Hitoki | Iwase | OS |
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| 41 | 16 | 1136 | 2008 | Inaugural Draft | C | Adam | Melhuse | MLB |
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| 42 | 13 | 1161 | 2008 | Inaugural Draft | 3B | Jeff | Cirillo | MLB |
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| 43 | 16 | 1192 | 2008 | Inaugural Draft | RP | Darrell | Rasner | MLB |
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| 45 | 16 | 1248 | 2008 | Inaugural Draft | OF | Reggie | Sanders | MLB |
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| 47 | 16 | 1304 | 2008 | Inaugural Draft | 1B | Garrett | Jones | MLB |
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| 50 | 13 | 1385 | 2008 | Inaugural Draft | RP | Dennys | Reyes | MLB |
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| 51 | 16 | 1416 | 2008 | Inaugural Draft | OF | Preston | Wilson | MLB |
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| 53 | 16 | 1472 | 2008 | Inaugural Draft | RP | Chase | Wright | MLB |
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| 54 | 13 | 1497 | 2008 | Inaugural Draft | C | Humberto | Cota | MLB |
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| 55 | 16 | 1528 | 2008 | Inaugural Draft | RP | Steve | Kline | MLB |
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| 56 | 13 | 1553 | 2008 | Inaugural Draft | OF | Buck | Coats | MLB |
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| 57 | 16 | 1584 | 2008 | Inaugural Draft | RP | Sean | White | MLB |
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| 59 | 16 | 1640 | 2008 | Inaugural Draft | RP | Scott | Feldman | MLB |
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| 60 | 13 | 1665 | 2008 | Inaugural Draft | SP | Kyohei | Muranaka | OS |
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